All modules for which code is available
- pyani
- pyani.anib
- pyani.aniblastall
- pyani.anim
- pyani.blast
- pyani.dependencies
- pyani.download
- pyani.fastani
- pyani.logger
- pyani.nucmer
- pyani.pyani_classify
- pyani.pyani_config
- pyani.pyani_files
- pyani.pyani_graphics
- pyani.pyani_jobs
- pyani.pyani_orm
- pyani.pyani_report
- pyani.pyani_tools
- pyani.run_multiprocessing
- pyani.run_sge
- pyani.scripts
- pyani.scripts.average_nucleotide_identity
- pyani.scripts.delta_filter_wrapper
- pyani.scripts.genbank_get_genomes_by_taxon
- pyani.scripts.parsers
- pyani.scripts.parsers.anib_parser
- pyani.scripts.parsers.aniblastall_parser
- pyani.scripts.parsers.anim_parser
- pyani.scripts.parsers.classify_parser
- pyani.scripts.parsers.common_parser
- pyani.scripts.parsers.createdb_parser
- pyani.scripts.parsers.download_parser
- pyani.scripts.parsers.fastani_parser
- pyani.scripts.parsers.index_parser
- pyani.scripts.parsers.listdeps_parser
- pyani.scripts.parsers.plot_parser
- pyani.scripts.parsers.report_parser
- pyani.scripts.parsers.run_common_parser
- pyani.scripts.parsers.scheduling_parser
- pyani.scripts.pyani_script
- pyani.scripts.subcommands.subcmd_anib
- pyani.scripts.subcommands.subcmd_aniblastall
- pyani.scripts.subcommands.subcmd_anim
- pyani.scripts.subcommands.subcmd_classify
- pyani.scripts.subcommands.subcmd_createdb
- pyani.scripts.subcommands.subcmd_download
- pyani.scripts.subcommands.subcmd_fastani
- pyani.scripts.subcommands.subcmd_index
- pyani.scripts.subcommands.subcmd_listdeps
- pyani.scripts.subcommands.subcmd_plot
- pyani.scripts.subcommands.subcmd_report
- pyani.tetra
- sqlalchemy.orm.attributes