pyani.scripts.parsers.index_parser module

Provides parser for index subcommand.

pyani.scripts.parsers.index_parser.build(subps: argparse._SubParsersAction, parents: Optional[List[argparse.ArgumentParser]] = None) → None

Return a command-line parser for the index subcommand.

Parameters:

• subps – collection of subparsers in main parser
• parents – parsers from which arguments are inherited

The index subcommand takes a single positional argument:

• indir (directory containing input genome sequence files)